Transcript: lnc-SLC17A5-1:3

Basic information

LNCipedia transcript ID: lnc-SLC17A5-1:3 
LNCipedia gene ID: lnc-SLC17A5-1
Location (hg38): chr6:73689789-73696263
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6219 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231652.2|HBMT00001255921.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.1493 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC17A5-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC17A5-1:3
5.0 lnc-SLC17A5-1:3
5.1 lnc-CEP162-68:1
5.2 lnc-SLC17A5-1:3