Transcript: lnc-SLC16A7-4:1

Basic information

LNCipedia transcript ID: lnc-SLC16A7-4:1 
LNCipedia gene ID: lnc-SLC16A7-4
Location (hg38): chr12:59319181-59323474
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4159 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT029042; FPKM1_group_6342_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.7459 non-coding 
CPAT coding probability 6.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC16A7-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC16A7-4:1
4.0 lnc-SLC16A7-4:1
4.1 lnc-SLC16A7-4:1
5.0 lnc-SLC16A7-4:1
5.1 lnc-CDK2-93:1
5.2 lnc-SLC16A7-4:1