Transcript: lnc-SLC16A6-1:2

Basic information

LNCipedia transcript ID: lnc-SLC16A6-1:2 
LNCipedia gene ID: lnc-SLC16A6-1
Location (hg38): chr17:68246629-68247916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1288 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265100.1|ENST00000577698.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.2449 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC16A6-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC16A6-1:2
5.0 lnc-SLC16A6-1:2
5.1 lnc-CYB561-95:2
5.2 lnc-SLC16A6-1:2