Transcript: lnc-SLC16A1-5:1

Basic information

LNCipedia transcript ID: lnc-SLC16A1-5:1 
LNCipedia gene ID: lnc-SLC16A1-5
Location (hg38): chr1:113125321-113126883
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1563 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT005317
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.0155 non-coding 
CPAT coding probability 29.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC16A1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC16A1-5:1
4.0 lnc-SLC16A1-5:1
4.1 lnc-SLC16A1-5:1
5.0 lnc-SLC16A1-5:1
5.1 lnc-PHTF1-5:1
5.2 lnc-SLC16A1-5:1