Transcript: lnc-SLC15A4-40:1

Basic information

LNCipedia transcript ID: lnc-SLC15A4-40:1 
LNCipedia gene ID: lnc-SLC15A4-40
RefSeq ID: NR_134995
Location (hg38): chr12:127648896-127655588
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134995.1
Alternative gene names: LOC105370068


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.1437 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC15A4-40:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DHX37-40:1
5.1 lnc-DHX37-40:1
5.2 lnc-SLC15A4-40:1