Transcript: lnc-SLC15A4-1:3

Basic information

LNCipedia transcript ID: lnc-SLC15A4-1:3 
LNCipedia gene ID: lnc-SLC15A4-1
Location (hg38): chr12:128178244-128191290
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 288 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021454; NONHSAT031908
Alternative gene names: XLOC_010258; linc-DHX37-12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.2076 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC15A4-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC15A4-1:3
3.1 lnc-SLC15A4-1:3
4.0 lnc-SLC15A4-1:3
4.1 lnc-SLC15A4-1:3
5.0 lnc-SLC15A4-1:3
5.1 lnc-RIMBP2-30:5
5.2 lnc-SLC15A4-1:3