Transcript: lnc-SLC14A1-3:2

Basic information

LNCipedia transcript ID: lnc-SLC14A1-3:2 
LNCipedia gene ID: lnc-SLC14A1-3
Location (hg38): chr18:45646153-45647930
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1778 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000590535.1
Alternative gene names: ENSG00000266968.1; RP11-116O18.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.5728 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC14A1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC14A1-3:2
4.0 lnc-SLC14A1-3:2
4.1 lnc-SLC14A1-3:2
5.0 lnc-SLC14A1-3:2
5.1 lnc-CTIF-55:2
5.2 lnc-SLC14A1-3:2