Transcript: lnc-SLC10A1-1:2

Basic information

LNCipedia transcript ID: lnc-SLC10A1-1:2 
LNCipedia gene ID: lnc-SLC10A1-1
Location (hg38): chr14:69765460-69767012
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1553 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000021485.1|ENCT00000135298.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.5644 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC10A1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC10A1-1:2
5.0 lnc-SLC10A1-1:2
5.1 lnc-ABCD4-64:2
5.2 lnc-SLC10A1-1:2