Transcript: lnc-SIRT4-8:1

Basic information

LNCipedia transcript ID: lnc-SIRT4-8:1 
LNCipedia gene ID: lnc-SIRT4-8
Ensembl Gene ID: ENSG00000275936
Ensembl Transcript ID: ENST00000617183
Location (hg38): chr12:120224744-120225421
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 678 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617183.1
Alternative gene names: ENSG00000275936.1; RP1-278C19.8; AC004263.2; AC004263.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -763.4518 non-coding 
CPAT coding probability 12.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIRT4-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SIRT4-8:1
4.1 lnc-SIRT4-8:1
5.0 lnc-SIRT4-8:1
5.1 lnc-SIRT4-8:1
5.2 lnc-SIRT4-8:1