Transcript: lnc-SIPA1L3-6:15

Basic information

LNCipedia transcript ID: lnc-SIPA1L3-6:15 
LNCipedia gene ID: lnc-SIPA1L3-6
Location (hg38): chr19:37817485-37826408
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267640.1|ENST00000592103.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.2874 non-coding 
CPAT coding probability 5.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIPA1L3-6:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIPA1L3-3:18
5.0 lnc-SIPA1L3-3:18
5.1 lnc-ZNF540-10:15
5.2 lnc-SIPA1L3-6:15