Transcript: lnc-SIPA1L3-6:12

Basic information

LNCipedia transcript ID: lnc-SIPA1L3-6:12 
LNCipedia gene ID: lnc-SIPA1L3-6
Location (hg38): chr19:37817421-37834154
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8468 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267640.1|MICT00000174780.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.4963 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIPA1L3-6:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIPA1L3-3:16
5.0 lnc-SIPA1L3-3:16
5.1 lnc-ZNF540-10:12
5.2 lnc-SIPA1L3-6:12