Transcript: lnc-SH3YL1-1:16

Basic information

LNCipedia transcript ID: lnc-SH3YL1-1:16 
LNCipedia gene ID: lnc-SH3YL1-1
Location (hg38): chr2:222361-231159
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 863 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT068491
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.557 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SH3YL1-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SH3YL1-1:16
4.0 lnc-SH3YL1-1:16
4.1 lnc-SH3YL1-1:16
5.0 lnc-SH3YL1-1:16
5.1 lnc-RAD51AP2-235:10
5.2 lnc-SH3YL1-1:16