Transcript: lnc-SH2B2-6:1

Basic information

LNCipedia transcript ID: lnc-SH2B2-6:1 
LNCipedia gene ID: lnc-SH2B2-6
Location (hg38): chr7:102033023-102034167
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1145 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606465.1
Alternative gene names: ENSG00000272544.1; CTA-357J21.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.3996 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SH2B2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SH2B2-6:1
4.0 lnc-SH2B2-6:1
4.1 lnc-SH2B2-6:1
5.0 lnc-SH2B2-6:1
5.1 lnc-SH2B2-6:1
5.2 lnc-SH2B2-6:1