Transcript: lnc-SGCA-4:2

Basic information

LNCipedia transcript ID: lnc-SGCA-4:2 
LNCipedia gene ID: lnc-SGCA-4
Location (hg38): chr17:50151274-50155226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3953 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236472.1|ENCT00000176324.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.3978 non-coding 
CPAT coding probability 10.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGCA-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SGCA-4:2
5.0 lnc-SGCA-4:2
5.1 lnc-ACSF2-14:2
5.2 lnc-SGCA-4:2