Transcript: lnc-SFPQ-2:8

Basic information

LNCipedia transcript ID: lnc-SFPQ-2:8 
LNCipedia gene ID: lnc-SFPQ-2
Location (hg38): chr1:35176380-35179105
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 662 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT002342
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.0877 non-coding 
CPAT coding probability 15.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SFPQ-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFPQ-2:8
4.0 lnc-SFPQ-2:8
4.1 lnc-SFPQ-2:8
5.0 lnc-SFPQ-2:8
5.1 lnc-COL8A2-33:8
5.2 lnc-SFPQ-2:8