Transcript: lnc-SETD1B-3:1

Basic information

LNCipedia transcript ID: lnc-SETD1B-3:1 
LNCipedia gene ID: lnc-SETD1B-3
Location (hg38): chr12:121795214-121799956
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1139 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT031445
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.0627 non-coding 
CPAT coding probability 23.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETD1B-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SETD1B-3:1
4.0 lnc-SETD1B-3:1
4.1 lnc-SETD1B-3:1
5.0 lnc-SETD1B-3:1
5.1 lnc-PSMD9-8:1
5.2 lnc-SETD1B-3:1