Transcript: lnc-SERPINI1-14:1

Basic information

LNCipedia transcript ID: lnc-SERPINI1-14:1 
LNCipedia gene ID: lnc-SERPINI1-14
Location (hg38): chr3:166943270-167021958
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3489 bp
Exons: 9
Sources: Nielsen et al.,2014
Alternative transcript names: l_2523_chr3:166661057-166712131_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.2803 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINI1-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINI1-14:1
4.0 lnc-SERPINI1-14:1
4.1 lnc-SERPINI1-14:1
5.0 lnc-SERPINI1-14:1
5.1 lnc-LRRIQ4-44:1
5.2 lnc-SERPINI1-14:1