Transcript: lnc-SERPINH1-1:1

Basic information

LNCipedia transcript ID: lnc-SERPINH1-1:1 
LNCipedia gene ID: lnc-SERPINH1-1
Ensembl Gene ID: ENSG00000255326
Ensembl Transcript ID: ENST00000527803
Location (hg38): chr11:75583196-75594665
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 651 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000527803.1; CTD-2530H12.4-001; OTTHUMT00000383526.1; NONHSAT023113
Alternative gene names: ENSG00000255326.1; CTD-2530H12.4; OTTHUMG00000165342.1; AP001922.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -298.0029 non-coding 
CPAT coding probability 13.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINH1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINH1-1:1
4.0 lnc-SERPINH1-1:1
4.1 lnc-SERPINH1-1:1
5.0 lnc-SERPINH1-1:1
5.1 lnc-DDIAS-87:1
5.2 lnc-SERPINH1-1:1