Transcript: lnc-SERPIND1-2:2

Basic information

LNCipedia transcript ID: lnc-SERPIND1-2:2 
LNCipedia gene ID: lnc-SERPIND1-2
Location (hg38): chr22:20723047-20725920
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2400 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000430719; ENST00000430719.1; AC007308.6-001; OTTHUMT00000331441.1; NONHSAT083591
Alternative gene names: ENSG00000234252; AC007308.6; ENSG00000234252.1; OTTHUMG00000153507.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.1041 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPIND1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POM121L4P-2:1
3.1 lnc-POM121L4P-2:1
4.0 lnc-POM121L4P-2:1
4.1 lnc-POM121L4P-2:1
5.0 lnc-POM121L4P-2:1
5.1 lnc-SERPIND1-2:1
5.2 lnc-SERPIND1-2:2