Transcript: lnc-SERPINB9-1:7

Basic information

LNCipedia transcript ID: lnc-SERPINB9-1:7 
LNCipedia gene ID: lnc-SERPINB9-1
Ensembl Gene ID: ENSG00000230438
Ensembl Transcript ID: ENST00000545177
Location (hg38): chr6:2854657-2881407
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1375 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000545177.4
Alternative gene names: ENSG00000230438.6; SERPINB9P1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.0871 non-coding 
CPAT coding probability 9.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB9-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SERPINB9-1:7
4.1 lnc-SERPINB9-1:7
5.0 lnc-SERPINB9-1:7
5.1 lnc-ECI2-97:2
5.2 lnc-SERPINB9-1:7