Transcript: lnc-SERPINB5-2:1

Basic information

LNCipedia transcript ID: lnc-SERPINB5-2:1 
LNCipedia gene ID: lnc-SERPINB5-2
Location (hg38): chr18:63422680-63423403
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000036343.1|ENCT00000193677.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.0907 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERPINB5-2:1
5.0 lnc-SERPINB5-2:1
5.1 lnc-WDR7-78:1
5.2 lnc-SERPINB5-2:1