Transcript: lnc-SERINC3-29:3

Basic information

LNCipedia transcript ID: lnc-SERINC3-29:3 
LNCipedia gene ID: lnc-SERINC3-29
RefSeq ID: NR_132343
Location (hg38): chr20:44451984-44465344
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 429 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132343.1
Alternative gene names: LINC01620


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -298.0576 non-coding 
CPAT coding probability 5.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERINC3-29:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MATN4-29:3
5.1 lnc-MATN4-29:3
5.2 lnc-SERINC3-29:3