Transcript: lnc-SERHL2-1:11

Basic information

LNCipedia transcript ID: lnc-SERHL2-1:11 
LNCipedia gene ID: lnc-SERHL2-1
Location (hg38): chr22:42500568-42512402
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4968 bp
Exons: 11
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000172250.10|MICT00000234659.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 406.7031 coding 
CPAT coding probability 99.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERHL2-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERHL2-1:11
5.0 lnc-SERHL2-1:11
5.1 lnc-SMDT1-8:2
5.2 lnc-SERHL2-1:11