Transcript: lnc-SERF1B-1:6

Basic information

LNCipedia transcript ID: lnc-SERF1B-1:6 
LNCipedia gene ID: lnc-SERF1B-1
Location (hg38): chr5:69903776-70474270
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 5137 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT101944
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.4479 coding 
CPAT coding probability 7.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERF1B-1:6 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERF1B-1:6
4.0 lnc-SERF1B-1:6
4.1 lnc-SERF1B-1:6
5.0 lnc-SERF1B-1:6
5.1 lnc-BDP1-22:5
5.2 lnc-SERF1B-1:6