Transcript: lnc-SERF1B-1:5

Basic information

LNCipedia transcript ID: lnc-SERF1B-1:5 
LNCipedia gene ID: lnc-SERF1B-1
Location (hg38): chr5:69875271-69920867
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 633 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT147338
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.4479 coding 
CPAT coding probability 53.27% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERF1B-1:5 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERF1B-1:5
4.0 lnc-SERF1B-1:5
4.1 lnc-SERF1B-1:5
5.0 lnc-SERF1B-1:5
5.1 lnc-BDP1-22:4
5.2 lnc-SERF1B-1:5