Transcript: lnc-SEMA4B-6:2

Basic information

LNCipedia transcript ID: lnc-SEMA4B-6:2 
LNCipedia gene ID: lnc-SEMA4B-6
Ensembl Gene ID: ENSG00000273691
Ensembl Transcript ID: ENST00000614119
Location (hg38): chr15:90024955-90026003
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1049 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614119.1
Alternative gene names: ENSG00000273691.1; RP11-617F23.2; AC087284.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -132.4269 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEMA4B-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SEMA4B-6:2
4.1 lnc-SEMA4B-6:2
5.0 lnc-SEMA4B-6:2
5.1 lnc-TTLL13P-14:2
5.2 lnc-SEMA4B-6:2