Transcript: lnc-SELENOM-1:1

Basic information

LNCipedia transcript ID: lnc-SELENOM-1:1 
LNCipedia gene ID: lnc-SELENOM-1
Location (hg38): chr22:31082159-31084868
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1066 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273387.1|MICT00000232227.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -218.7775 non-coding 
CPAT coding probability 21.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOM-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP3-412A9.11.1-1:2
5.0 lnc-RP3-412A9.11.1-1:2
5.1 lnc-PLA2G3-1:3
5.2 lnc-SELENOM-1:1