Transcript: lnc-SELENOF-12:1

Basic information

LNCipedia transcript ID: lnc-SELENOF-12:1 
LNCipedia gene ID: lnc-SELENOF-12
Location (hg38): chr1:87335905-87336147
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 243 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_30_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.4159 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOF-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP4-604K5.1.1-12:1
4.0 lnc-RP4-604K5.1.1-12:1
4.1 lnc-RP4-604K5.1.1-12:1
5.0 lnc-RP4-604K5.1.1-12:1
5.1 lnc-RBMXL1-16:1
5.2 lnc-SELENOF-12:1