Transcript: lnc-SCN2A-10:1

Basic information

LNCipedia transcript ID: lnc-SCN2A-10:1 
LNCipedia gene ID: lnc-SCN2A-10
Location (hg38): chr2:164321933-164322223
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 291 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT075216
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 79.8639 coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SCN2A-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCN2A-10:1
4.0 lnc-SCN2A-10:1
4.1 lnc-SCN2A-10:1
5.0 lnc-SCN2A-10:1
5.1 lnc-TBR1-20:1
5.2 lnc-SCN2A-10:1