Transcript: lnc-SCGB2B2-131:1

Basic information

LNCipedia transcript ID: lnc-SCGB2B2-131:1 
LNCipedia gene ID: lnc-SCGB2B2-131
Location (hg38): chr19:34299677-34329198
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1122 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000514883
Alternative gene names: ENSG00000249886


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.9916 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCGB2B2-131:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPS4XP21-1:1
3.1 lnc-RPS4XP21-1:1
4.0 lnc-RPS4XP21-1:1
4.1 lnc-RPS4XP21-1:1
5.0 lnc-RPS4XP21-1:1
5.1 lnc-SCGB2B2-21:1
5.2 lnc-SCGB2B2-131:1