Transcript: lnc-SCEL-8:1

Basic information

LNCipedia transcript ID: lnc-SCEL-8:1 
LNCipedia gene ID: lnc-SCEL-8
Location (hg38): chr13:77329354-77329788
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 435 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015362.1|FTMT25200004268.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -686.9671 non-coding 
CPAT coding probability 4.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCEL-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SCEL-8:1
5.0 lnc-SCEL-8:1
5.1 lnc-COL4A2-223:1
5.2 lnc-SCEL-8:1