Transcript: lnc-SBF2-2:4

Basic information

LNCipedia transcript ID: lnc-SBF2-2:4 
LNCipedia gene ID: lnc-SBF2-2
Location (hg38): chr11:9756591-9757845
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019573
Alternative gene names: XLOC_009371; linc-TMEM41B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.7776 non-coding 
CPAT coding probability 11.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SBF2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SBF2-1:4
3.1 lnc-SBF2-2:4
4.0 lnc-SBF2-2:4
4.1 lnc-SBF2-2:4
5.0 lnc-SBF2-2:4
5.1 lnc-C11orf16-30:4
5.2 lnc-SBF2-2:4