Transcript: lnc-SBF2-2:1

Basic information

LNCipedia transcript ID: lnc-SBF2-2:1 
LNCipedia gene ID: lnc-SBF2-2
Location (hg38): chr11:9754557-9765536
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2413 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019572; NONHSAT017935
Alternative gene names: XLOC_009371; linc-TMEM41B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.8841 non-coding 
CPAT coding probability 58.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SBF2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SBF2-1:1
3.1 lnc-SBF2-2:1
4.0 lnc-SBF2-2:1
4.1 lnc-SBF2-2:1
5.0 lnc-SBF2-2:1
5.1 lnc-C11orf16-30:1
5.2 lnc-SBF2-2:1