Transcript: lnc-SAPCD2-2:1

Basic information

LNCipedia transcript ID: lnc-SAPCD2-2:1 
LNCipedia gene ID: lnc-SAPCD2-2
Location (hg38): chr9:137112378-137113249
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 639 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT135687
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.0225 non-coding 
CPAT coding probability 44.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SAPCD2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf140-2:1
4.0 lnc-C9orf140-2:1
4.1 lnc-C9orf140-2:1
5.0 lnc-C9orf140-2:1
5.1 lnc-RNF208-10:1
5.2 lnc-SAPCD2-2:1