Transcript: lnc-S100A13-2:14

Basic information

LNCipedia transcript ID: lnc-S100A13-2:14 
LNCipedia gene ID: lnc-S100A13-2
Location (hg38): chr1:153631661-153634361
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 795 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272030.1|ENST00000469931.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.3582 non-coding 
CPAT coding probability 5.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-S100A13-2:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-S100A13-2:14
5.0 lnc-S100A13-2:14
5.1 lnc-S100A14-2:16
5.2 lnc-S100A13-2:14