Transcript: lnc-RWDD3-7:18

Basic information

LNCipedia transcript ID: lnc-RWDD3-7:18 
LNCipedia gene ID: lnc-RWDD3-7
Ensembl Gene ID: ENSG00000237435
Ensembl Transcript ID: ENST00000624750
Location (hg38): chr1:95992012-96022778
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 766 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624750.3
Alternative gene names: ENSG00000237435.9; RP11-147C23.1; AC099566.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -146.1903 non-coding 
CPAT coding probability 10.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RWDD3-7:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RWDD3-7:18
4.1 lnc-RWDD3-7:18
5.0 lnc-RWDD3-7:18
5.1 lnc-BTBD8-51:10
5.2 lnc-RWDD3-7:18