Transcript: lnc-RUNX1-12:3

Basic information

LNCipedia transcript ID: lnc-RUNX1-12:3 
LNCipedia gene ID: lnc-RUNX1-12
Location (hg38): chr21:34887046-35984710
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1316 bp
Exons: 11
Sources: NONCODE v4
Alternative transcript names: NONHSAT081899
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0599 non-coding 
CPAT coding probability 21.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUNX1-12:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SETD4-12:3
4.0 lnc-RUNX1-12:3
4.1 lnc-RUNX1-12:3
5.0 lnc-RUNX1-12:3
5.1 lnc-CRYZL1-25:4
5.2 lnc-RUNX1-12:3