Transcript: lnc-RUBCNL-4:6

Basic information

LNCipedia transcript ID: lnc-RUBCNL-4:6 
LNCipedia gene ID: lnc-RUBCNL-4
Location (hg38): chr13:46276447-46277697
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 527 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021993; NONHSAT033636
Alternative gene names: XLOC_010596; linc-LCP1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.6761 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUBCNL-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA0226L-3:1
3.1 lnc-KIAA0226L-4:1
4.0 lnc-KIAA0226L-4:1
4.1 lnc-KIAA0226L-4:1
5.0 lnc-KIAA0226L-4:1
5.1 lnc-CCDC169-118:6
5.2 lnc-RUBCNL-4:6