Transcript: lnc-RTP4-6:2

Basic information

LNCipedia transcript ID: lnc-RTP4-6:2 
LNCipedia gene ID: lnc-RTP4-6
Location (hg38): chr3:187743669-187745420
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 553 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223401.1|ENST00000450760.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 62.71% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RTP4-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-211G3.3.1-1:3
5.0 lnc-RP11-211G3.3.1-1:3
5.1 lnc-FAM131A-52:2
5.2 lnc-RTP4-6:2