Transcript: lnc-RSPH10B2-2:1

Basic information

LNCipedia transcript ID: lnc-RSPH10B2-2:1 
LNCipedia gene ID: lnc-RSPH10B2-2
Location (hg38): chr7:7177952-7178324
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 373 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT119101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.479 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RSPH10B2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RSPH10B2-2:1
4.0 lnc-RSPH10B2-2:1
4.1 lnc-RSPH10B2-2:1
5.0 lnc-RSPH10B2-2:1
5.1 lnc-SLC29A4-32:1
5.2 lnc-RSPH10B2-2:1