Transcript: lnc-RREB1-9:6

Basic information

LNCipedia transcript ID: lnc-RREB1-9:6 
LNCipedia gene ID: lnc-RREB1-9
Location (hg38): chr6:6885673-6901427
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3569 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000082570.1|ENCT00000368626.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.6923 non-coding 
CPAT coding probability 5.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RREB1-9:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RREB1-4:5
5.0 lnc-RREB1-4:5
5.1 lnc-PRPF4B-84:6
5.2 lnc-RREB1-9:6