Transcript: lnc-RPS24-3:19

Basic information

LNCipedia transcript ID: lnc-RPS24-3:19 
LNCipedia gene ID: lnc-RPS24-3
Ensembl Gene ID: ENSG00000282863
Ensembl Transcript ID: ENST00000421324
Location (hg38): chr10:78238255-78675109
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 535 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421324.4
Alternative gene names: ENSG00000282863.1; RP11-90J7.3; AC012560.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -61.0523 non-coding 
CPAT coding probability 18.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS24-3:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RPS24-3:19
4.1 lnc-RPS24-3:19
5.0 lnc-RPS24-3:19
5.1 lnc-MTRNR2L5-236:15
5.2 lnc-RPS24-3:19