Transcript: lnc-RPS24-3:11

Basic information

LNCipedia transcript ID: lnc-RPS24-3:11 
LNCipedia gene ID: lnc-RPS24-3
Ensembl Gene ID: ENSG00000282863
Ensembl Transcript ID: ENST00000634930
Location (hg38): chr10:78179174-78527338
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634930.1
Alternative gene names: ENSG00000282863.1; RP11-90J7.3; AC012560.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.0658 non-coding 
CPAT coding probability 3.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS24-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RPS24-3:11
4.1 lnc-RPS24-3:11
5.0 lnc-RPS24-3:11
5.1 lnc-MTRNR2L5-236:2
5.2 lnc-RPS24-3:11