Transcript: lnc-RPS17-1:5

Basic information

LNCipedia transcript ID: lnc-RPS17-1:5 
LNCipedia gene ID: lnc-RPS17-1
Location (hg38): chr15:82536788-82540133
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1922 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT047834
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 562.7722 coding 
CPAT coding probability 5.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS17-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-152F13.10.1-1:2
4.0 lnc-RP11-152F13.10.1-1:2
4.1 lnc-RP11-152F13.10.1-1:2
5.0 lnc-RP11-152F13.10.1-1:2
5.1 lnc-FSD2-10:4
5.2 lnc-RPS17-1:5