Transcript: lnc-RPS10-2:1

Basic information

LNCipedia transcript ID: lnc-RPS10-2:1 
LNCipedia gene ID: lnc-RPS10-2
Location (hg38): chr6:34352809-34354204
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1396 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BI253382_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8209 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS10-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS10-2:1
4.0 lnc-RPS10-2:1
4.1 lnc-RPS10-2:1
5.0 lnc-RPS10-2:1
5.1 lnc-SPDEF-7:1
5.2 lnc-RPS10-2:1