Transcript: lnc-RPRML-3:28

Basic information

LNCipedia transcript ID: lnc-RPRML-3:28 
LNCipedia gene ID: lnc-RPRML-3
Location (hg38): chr17:47051273-47051802
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 429 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000508811
Alternative gene names: ENSG00000250104


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.6144 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPRML-3:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDC27-3:1
3.1 lnc-CDC27-2:1
4.0 lnc-RPRML-3:28
4.1 lnc-RPRML-3:28
5.0 lnc-RPRML-3:28
5.1 lnc-GFAP-56:23
5.2 lnc-RPRML-3:28