Transcript: lnc-RPP25-4:2

Basic information

LNCipedia transcript ID: lnc-RPP25-4:2 
LNCipedia gene ID: lnc-RPP25-4
Location (hg38): chr15:74994758-74995437
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 680 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025559.1|FTMT25800002920.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.4634 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPP25-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPP25-4:2
5.0 lnc-RPP25-4:2
5.1 lnc-PEAK1-50:2
5.2 lnc-RPP25-4:2