Transcript: lnc-RPIA-2:2

Basic information

LNCipedia transcript ID: lnc-RPIA-2:2 
LNCipedia gene ID: lnc-RPIA-2
Location (hg38): chr2:88627829-88631819
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1324 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00002711
Alternative gene names: XLOC_001562; linc-RPIA


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.2542 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPIA-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPIA-2:2
3.1 lnc-RPIA-2:2
4.0 lnc-RPIA-2:2
4.1 lnc-RPIA-2:2
5.0 lnc-RPIA-2:2
5.1 lnc-POLE4-223:5
5.2 lnc-RPIA-2:2