Transcript: lnc-RPIA-29:1

Basic information

LNCipedia transcript ID: lnc-RPIA-29:1 
LNCipedia gene ID: lnc-RPIA-29
Location (hg38): chr2:91736913-91774884
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 248 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1680:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.3462 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPIA-29:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC073416.2-23:1
4.1 lnc-AC073416.2-23:1
5.0 lnc-AC073416.2-23:1
5.1 lnc-SLC9A4-159:1
5.2 lnc-RPIA-29:1