Transcript: lnc-RNF34-1:5

Basic information

LNCipedia transcript ID: lnc-RNF34-1:5 
LNCipedia gene ID: lnc-RNF34-1
Location (hg38): chr12:121375394-121399915
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1023 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT031428
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.5762 non-coding 
CPAT coding probability 5.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF34-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF34-1:5
4.0 lnc-RNF34-1:5
4.1 lnc-RNF34-1:5
5.0 lnc-RNF34-1:5
5.1 lnc-PSMD9-24:3
5.2 lnc-RNF34-1:5